DeltaProt: a software toolbox for comparative genomics

BMC Bioinformatics

Table 2 Statistical models and tests available in DeltaProt to detect common trends in several protein alignments

Groups	Composition	Substitutions	Properties
2	Cumulative Mann-Kendall Wilcoxon paired^§	Fisher's exact Chi-square^§	Cumulative Mann-Kendall Wilcoxon paired^§
> 2	Cumulative Mann-Kendall	_	Cumulative Mann-Kendall

^§Tests that should be used if we may not assume statistical independence within each group because of horizontal gene transfer and recombination events. These tests are applied on mean values of each group.

ISSN: 1471-2105