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Table 3 Substitutions of amino acid x→ y

From: DeltaProt: a software toolbox for comparative genomics

Substitutions of x:

y

Not y

Adaptation M→P:

N x , y ( M , P )

89

N x , n o n y ( M , P )

1754

Background M→M:

N x , y ( M , M )

14

N x , n o n y ( M , M )

514

  1. A 2×2 table summarizing counts of the SP-matrix for one particular substitution x→y, together with its background. The numerical example in bold is for the substitution A→I of the same data as in Figure 4, with p-value = 0.025 by Fisher's exact test.