Table 4 Filters used in the candidate scoring process
Site score | Description |
|---|---|
Cons 80 | The predicted stem has a conservation score of ≥ 80 |
Cons 90 | The predicted stem has a conservation score of ≥ 90 |
AG mutation | If a distant sub-tree has a DNA coded G at the position of an A-G mismatch (see also Figure 5). |
AG_both | There are A-G mismatches on both stem arms |
Annotated aa change | The A-G mismatch results in an amino-acid discrepancy |
ds G | The nucleotide downstream of the A-G mismatch position is a G |