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Figure 3 | BMC Bioinformatics

Figure 3

From: SNPexp - A web tool for calculating and visualizing correlation between HapMap genotypes and gene expression levels

Figure 3

Visualization of SNPexp results. The per-SNP calculated (-log10) p-values for the correlation (all 210 unrelated HapMap phase II individuals pooled together) between SNPs in a genetic region on chromosome 4 (8,168,000-8,790,000 bp) and the expression of gene ACOX3 as visualized on the UCSC Genome Browser. This plot shows previously published eQTL results from [9] (strongest SNP present in both plots: rs827000 p < 10-12). The browser can be customized in different ways to provide gene annotations and SNP positions for the plot.

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