Protein feature | Number of Features | Source |
---|---|---|
Sequence length (L) | 1 | In-house script |
Count and composition of amino acids | 40 | In-house script |
Number and percentage of positive, negative and all charged residues, as well as the net charges | 8 | In-house script |
Number and percentage of small (T and D), tiny (G, A, S and P), aromatic (F, H, Y, W), aliphatic, hydrophobic and polar residues | 12 | In-house script |
Number and percentage of residues which can form hydrogen bond in sidechain | 2 | In-house script |
Number of sulfide atoms | 1 | In-house script |
Average solubility of amino acids in aqueous solutions under room temperature | 1 | ** |
The average of the maximum solvent accessible surface area (ASA) of each amino acid | 1 | Eisenhaber[50] |
Predicted isoelectric point (pI) of the protein, the average pI on all residues (pIa) | 2 | ProtParam[51] |
Instability index and instability class | 2 | Â |
Aliphatic index | 1 | Â |
Gravy hydropathy index | 1 | Â |
Composition of the predicted secondary structure residues | 3 | Psipred[52] |
Predicted percentages of buried/exposed residues | 2 | Accpro[40] |
The overall length and percentage of all coils, rem465, and hotloop | 6 | disEMBL[53] |