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Table 1 Number of tomato data sets for which each estimator ranked in the top four.

From: Validation of differential gene expression algorithms: Application comparing fold-change estimation to hypothesis testing

algorithm

cross validation posterior

predictive expected loss

Wilcoxon stat. with emp. null

3

2

t stat. with emp. null

1

1

Wilcoxon stat. with locfdr

1

1

t stat. with locfdr

6

6

moderated t stat. with locfdr

5

5

moderated t stat. with limma

3

1

fold change shrinkage

1

1

Bayes factor

2

1

BIC

0

0

AICc

1

5

fold change > 1.41

0

0

fold change > 1

0

0

fold change > 2

0

0

all nulls true

1

1

all nulls false

0

0