Skip to main content

Table 3 Decision tree weights

From: Using simple artificial intelligence methods for predicting amyloidogenesis in antibodies

Edge

Weight

Reference for weight

CDR

1.0

Ratio of CDR:FR mutations

FR

0.79

 

CDR - exposed

0.78

Ratio of buried:exposed CDR mutations

CDR - buried

1.0

 

FR - exposed

1.0

Ratio of buried:exposed FR mutations

FR - buried

0.85

 

CDR - exposed - Δ

0.69

Ratio of mutations increasing (Δ) sheet-forming propensities to mutations decreasing (▽) sheet-forming propensities in exposed CDR residues

CDR - exposed - â–½

0.31

 

CDR - buried - Δ

1.00

Ratio of mutations increasing (Δ) sheet-forming propensities to mutations decreasing (▽) sheet-forming propensities in buried CDR residues

CDR - buried - â–½

0.76

 

FR - exposed - Δ

1.00

Ratio of mutations increasing (Δ) sheet-forming propensities to mutations decreasing (▽) sheet-forming propensities in exposed FR residues

FR - exposed - â–½

0.95

 

FR - buried - Δ

0.74

Ratio of mutations increasing (Δ) sheet-forming propensities to mutations decreasing (▽) sheet-forming propensities in buried FR residues

FR - buried --â–½

0.43