Figure 2From: An effective approach for identification of in vivo protein-DNA binding sites from paired-end ChIP-Seq dataSchematic overview of the SIPeS algorithm. Sequenced short tags (here 40 bp) from paired-end sequencing are mapped onto the reference genome to find their corresponding aligned sequences or 'mates match' within a range of 80 to 500 bp. The fragment's start position and end position are then used to determine the putative binding sites.Back to article page