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Figure 4 | BMC Bioinformatics

Figure 4

From: An effective approach for identification of in vivo protein-DNA binding sites from paired-end ChIP-Seq data

Figure 4

Comparisons of the detection of the frequency of AMS binding sites. The frequency of AMS binding motif occurrence within 200 bp from the AMS peak centers was compared using Cisgenome, MACS single-end mode (SE), MACS paired-end mode (PE) and SIPeS. From the smaller peak numbers to the higher, SIPeS generated a higher percentage of peaks containing the AMS binding motif than those of other three approaches.

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BMC Bioinformatics

ISSN: 1471-2105

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