HDAPD: a web tool for searching the disease-associated protein structures

BMC Bioinformatics

Table 2 The searched results for two diseases and a disease-associated protein namely Lung cancer, Diabetes, and Tumor protein 53 by HDAPD and NCBI Entrez, EMBL, UniProt, and GHR are compared.

	describe	HDAPD	NCBI Entrez	EMBL	UniProt
Disease & protein	Lung cancer	293			699
	tumor protein 53	1			1
	diabetes	161			705
Protein sequences	Lung cancer	-	20314	1524	765
	tumor protein 53	-	679	35	32
	diabetes	-	19353	751	991
Protein structure	Lung cancer	2155	17	33	2360
	tumor protein 53	61	1	22	79
	diabetes	906	254	547	1082
GO: biological process	Lung cancer	1872	none	0	625
	tumor protein 53	48	none	0	31
	diabetes	1127	none	1	902
GO: cellular component	Lung cancer	2017	none	0	668
	tumor protein 53	11	none	0	31
	diabetes	1080	none	0	895
GO: molecular function	Lung cancer	1953	none	0	662
	tumor protein 53	12	none	0	27
	diabetes	1096	none	0	862
Number of KEGG paths involved	Lung cancer	893	56	1	26
	tumor protein 53	20	128	0	2
	diabetes	354	65	21	60
literature	Lung cancer	651248	173048	105635	2876
	tumor protein 53	3831	15739	2818	251
	diabetes	13635	339343	325435	11155

* The GO information in NCBI Entrez is indirectly provided through a hyperlink to PDB.

ISSN: 1471-2105