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Table 2 Empirically estimated performance measures for the tests of differential connectivity of single genes using correlation scores applied at a targeted nominal level of 5%.

From: A statistical framework for differential network analysis from microarray data

n

ρ

Sensitivity

Specificity

TDR

TNR

  

unadjusted

adjusted

unadjusted

adjusted

unadjusted

adjusted

unadjusted

adjusted

50

.5

.990

.893

.949

.970

.951

.970

.989

.982

200

 

1

1

.946

.970

.949

.971

1

1

50

.7

1

1

.948

.969

.951

.970

1

1

200

 

1

1

.950

.973

.952

.973

1

1

50

.9

1

1

.946

.969

.948

.970

1

1

200

 

1

1

.948

.968

.950

.969

1

1

  1. The measures are reported based on both unadjusted p-values and p-values adjusted based on the BH multiplicity correction. The number of "important" genes was 10 and the total number of genes was 20.