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Table 3 Empirically estimated performance measures for the tests of differential connectivity of single genes using correlation scores applied at a targeted nominal level of 5%.

From: A statistical framework for differential network analysis from microarray data

n

ρ

Sensitivity

Specificity

TDR

TNR

  

unadjusted

adjusted

unadjusted

adjusted

unadjusted

adjusted

unadjusted

adjusted

50

.5

.760

.340

.947

.996

.616

.913

.973

.931

200

 

1

.999

.949

.994

.687

.946

1

1

50

.7

.986

.862

.948

.993

.676

.935

.998

.985

200

 

1

1

.949

.993

.685

.943

1

1

50

.9

1

.996

.946

.992

.675

.936

1

1

200

 

1

1

.949

.994

.684

.948

1

1

  1. The measures are reported based on both unadjusted p-values and p-values adjusted based on the BH multiplicity correction. The number of "important" genes was 10 and the total number of genes was 100.