Table 1 Amino acid classification
From: Amino acid classification based spectrum kernel fusion for protein subnuclear localization
Method | Window limit | Amino acid classification | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
4-Cat | 6 | ALVIFWMP | STYCNGQ | KRH | DE | RK | DE | C | Â | Â |
7-Cat | 4 | AGV | ILFP | YMTS | HNQW | Â | Â | Â | Â | Â |
20-Cat | 3 | A G V I L F P Y M T S H N Q W R K D E C | ||||||||
ms | 4 | AVLIMC | WYHF | TQSN | RK | ED | GP | Â | Â | Â |
lesk | 4 | AST | CVILWYMPF | HQN | RK | ED | G | Â | Â | Â |
F-Ic4 | 4 | AWM | GST | HPY | CVIFL | DNQ | ER | K | Â | Â |
F-Ic2 | 3 | AWM | GS | HPY | CVI FL | DNQ | ER | K | T | Â |
F-IIIc4 | 3 | ACV | HPL | DQ | S | ERGN | F | IMT | KW | Y |
F-Vc4 | 3 | AWHC | G | LEPV | KYMT | IN | Q | D | S | Â |