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Table 5 Some significant SNP groups identified by our method in the candidate regions on WTCCC RA data.

From: Identifying main effects and epistatic interactions from large-scale SNP data via adaptive group Lasso

SNP Groups

Location

Related Genes

P-value

(rs4988822, rs3135392)

6p21.3

(HLA-DRA, HLA-DRA)

3.33 × 10-15

(rs17429127, rs2157082)

6p21.3

(HLA-DRA, HLA-DRA)

< 10-30

(rs1358169, rs6460831)

7p21.3

(THSD7A, THSD7A)

< 10-30

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BMC Bioinformatics

ISSN: 1471-2105

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