Skip to main content

Table 2 Total runtime. Amount of time required to process all proteins with a signal peptides, in seconds.

From: Decoding HMMs using the k best paths: algorithms and applications

  Probability only Tree-based Matrix-based
k = 100 84 145 90
k = 200 161 303 166
k = 300 231 425 241
k = 400 296 553 317