Skip to main content

Table 5 Performance achieved using predicted and structural surface.

From: Predicting the protein-protein interactions using primary structures with predicted protein surface

 

Acc. (%)

Fm. (%)

Prec. (%)

Sens. (%)

Spec. (%)

Predicted surface

     

   Trial 1

96.2

38.1

58.5

28.2

99.1

   Trial 2

96.2

40.9

57.4

31.8

99.0

   Trial 3

96.1

38.2

54.3

29.4

98.9

   Trial 4

96.3

38.7

61.5

28.2

99.2

   Trial 5

96.6

40.3

70.6

28.2

99.5

   Trial 6

96.4

43.1

62.2

32.9

99.1

   Trial 7

96.7

41.0

75.0

28.2

99.6

   Trial 8

96.4

40.9

61.9

30.6

99.2

   Trial 9

94.7

37.5

36.3

38.8

97.1

   Trial 10

95.7

39.7

47.5

34.1

98.4

   Overall

96.1 ± 0.6

39.8 ± 1.7

58.5 ± 11.0

31.1 ± 3.5

98.9 ± 0.7

Structural surface

     

   Trial 1

96.0

39.7

52.9

31.8

98.8

   Trial 2

96.6

41.3

69.4

29.4

99.4

   Trial 3

96.1

40.3

55.1

31.8

98.9

   Trial 4

96.3

39.7

61.0

29.4

99.2

   Trial 5

96.3

40.3

59.1

30.6

99.1

   Trial 6

96.4

42.7

60.9

32.9

99.1

   Trial 7

96.2

41.5

56.0

32.9

98.9

   Trial 8

96.5

42.5

64.3

31.8

99.2

   Trial 9

95.9

38.8

50.0

31.8

98.6

   Trial 10

96.0

40.3

51.9

32.9

98.7

   Overall

96.2 ± 0.2

40.7 ± 1.3

58.1 ± 6.0

31.5 ± 1.3

99.0 ± 0.3

  1. ASA values of predicted surface are obtained from the adopted ASA predictor. ASA values of structural surface are obtained using the DSSP program.