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Table 3 comparison of 'C-Par' and 'D-Par' implementations. This table details the run times for C-Par and D-Par implementations using RNA sequences of various lengths and also computes the speed ratio among them.

From: Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspective

Sequence Length

Time (s)

 

C-Par

D-Par

C:D

21

10.52

8.72

1.206422018

22

13.82

11.32

1.220848057

23

17.97

14.88

1.20766129

25

29.65

23.52

1.260629252

30

88.54

71.33

1.241272957

34

188.65

147.32

1.280545751

38

362.93

289.69

1.252821982

40

493.86

399.51

1.236164301

40

493.9

397.71

1.241859646

41

573.51

467.41

1.226995571

42

661.65

541.78

1.221252169

46

1140.71

913.41

1.248847724

47

1297.22

1055.22

1.229336063

52

2373.26

1965.62

1.207384947

59

5055.58

4206.06

1.201975245