From: Analysis of interactions between ribosomal proteins and RNA structural motifs
Contact surface composition (% values) | |||||||
---|---|---|---|---|---|---|---|
RNA side | Protein side | ||||||
 | R-CS | SM R -CS | TL R -CS |  | P-CS | SM P -CS | TL P -CS |
P | 3.68 (± 0.32) | 3.73 (± 0.70) | 3.67 (± 0.87) | Ala | 3.93 (± 0.50) | 5.02 (± 1.25) | 2.70 (± 1.27) |
OP1 | 9.56 (± 0.76) | 9.22 (± 1.43) | 8.28 (± 1.23) | Arg | 21.92 (± 1.67) | 24.87 (± 4.08) | 27.99(± 5.43) |
OP2 | 5.61 (± 0.47) | 5.79 (± 0.78) | 5.00 (± 1.04) | Asn | 4.41 (± 0.47) | 3.40 (± 0.85) | 3.07 (± 1.27) |
O5' | 3.20 (± 0.28) | 2.99 (± 0.59) | 2.92 (± 0.72) | Asp | 2.58 (± 0.38) | 2.53 (± 0.95) | 1.42 (± 0.94) |
C5' | 9.43 (± 0.71) | 8.95 (± 1.24) | 9.79 (± 1.60) | Cys | 0.19 (± 0.07) | 0.16 (± 0.15) |  |
C4' | 8.55 (± 0.65) | 8.13 (± 1.09) | 8.86 (± 1.35) | Glu | 3.11 (± 0.36) | 3.73 (± 0.88) | 2.32 (± 1.09) |
O4' | 4.75 (± 0.39) | 4.05 (± 0.60) | 5.18 (± 1.01) | Gln | 4.57 (± 0.61) | 2.94 (± 0.78) | 1.06 (± 0.88) |
C3' | 6.80 (± 0.53) | 6.72 (± 0.97) | 6.95 (± 1.09) | Gly | 6.61 (± 0.80) | 4.97 (± 1.25) | 5.51 (± 2.38) |
O3' | 6.57 (± 0.55) | 6.42 (± 0.89) | 7.31 (± 1.34) | His | 4.63 (± 0.53) | 4.81 (± 1.14) | 5.20 (± 1.81) |
C2' | 7.12 (± 0.52) | 6.64 (± 0.85) | 6.56 (± 1.18) | Ile | 2.17 (± 0.25) | 1.63 (± 0.50) | 1.24 (± 0.75) |
O2' | 7.46 (± 0.56) | 6.57 (± 0.91) | 7.35 (± 1.25) | Leu | 3.71 (± 0.38) | 5.04 (± 1.13) | 2.48 (± 1.91) |
C1' | 6.14 (± 0.46) | 5.32 (± 0.64) | 5.82 (± 1.02) | Lys | 14.65 (± 1.06) | 13.91 (± 1.97) | 10.03 (± 2.01) |
 |  |  |  | Met | 2.00 (± 0.31) | 2.76 (± 0.75) | 3.05 (± 1.87) |
P | 18.85 | 18.74 | 16.95 | Phe | 3.03 (± 0.41) | 3.69 (± 1.05) | 10.77 (± 3.18) |
B | 60.02 | 55.79 | 60.74 | Pro | 3.84 (± 0.56) | 3.14 (± 0.82) | 4.12 (± 1.94) |
R | 21.13 | 25.47 | 22.31 | Ser | 4.74 (± 0.52) | 5.90 (± 1.35) | 5.67 (± 2.42) |
 |  |  |  | Thr | 4.67 (± 0.45) | 2.75 (± 0.66) | 1.77 (± 1.09) |
 |  |  |  | Trp | 1.94 (± 0.38) | 2.46 (± 0.98) | 3.56 (± 2.07) |
 |  |  |  | Tyr | 3.69 (± 0.49) | 3.05 (± 0.86) | 4.12 (± 1.73) |
 |  |  |  | Val | 3.65 (± 0.47) | 3.26 (± 0.79) | 3.93 (± 1.53) |