Skip to main content
Figure 2 | BMC Bioinformatics

Figure 2

From: NeMo: Network Module identification in Cytoscape

Figure 2

Interactome-scale community-finding algorithm comparison. (a) ROC comparing NeMo with single-link, NeMo with complete-linkage, MCODE, kMetis, and spectral clustering for the identification of MIPS human complexes. (b) Precision and recall curves comparing NeMo with single-link, NeMo with complete-linkage, MCODE, kMetis, and spectral clustering for the identification of MIPS human complexes. Each algorithm produced a set of putative network modules embedded in the interactome. The putative network module set of each algorithm was used to rank a set of 380 MIPS complexes and 380 randomized networks by reconstruction fidelity (Jaccard coefficient).

Back to article page