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Table 3 Experimental results when T s varies

From: Accurate HLA type inference using a weighted similarity graph

T s Accuracy(%)
0.55 0.60 0.65 0.70 0.75 0.80 0.85 0.90  
HLA-A 95.89 95.89 96.50 95.89 95.89 95.89 95.89 95.89
HLA-B 95.00 94.64 94.31 94.64 94.64 94.64 94.64 94.64
HLA-C 96.34 96.34 96.65 95.73 96.04 95.43 95.12 93.29
HLA-DRB1 83.87 83.87 83.87 83.87 83.87 83.87 83.87 83.87
HLA-DQA1 98.29 98.29 98.29 97.71 98.00 97.71 97.71 96.57
HLA-DQB1 97.14 97.43 97.43 97.14 97.14 96.86 97.14 96.86
  1. Accuracy of WSG-HI in the leave-one-out test using genotype data from the 200kb region centered at each HLA gene when the threshold T s varies from 0.55 to 0.90 and T mis = 2.