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Table 5 Comparison with other systems on AIMED corpus

From: Learning an enriched representation from unlabeled data for protein-protein interaction extraction

Method or author

F-score

AUC

(Miwa et al., 2009) [16]

65.2

89.3

Our method (Combined)

63.5

87.2

(Miwa et al., 2009) [12]

62.7 (64.3)

83.2 (87.9)

Our method (Lex)

61.4

86.11

Our method (FCD)

60.1

83.8

(Miyao et al., 2008) [11]

59.5

-

(Airola et al., 2008) [10]

56.4

84.8

(Sætre et al., 2007) [9]

52.0

-

(Mitsumori et al., 2006) [14]

47.7

-

  1. For the work [12], the scores in brackets are their reported results obtained by removing all the examples with self-interaction protein pairs in AIMED corpus.