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Table 1 Comparison of Phylometrics to existing commonly-used tools for generating phylogenetic trees.

From: Phylometrics: a pipeline for inferring phylogenetic trees from a sequence relationship network perspective

 

Phylometrics

STAP

ARB

MEGA 4.1

User Interface

Web Browser

Command line

GUI

GUI

Where is it installed?

Local or Remote

Local

Local

Local

Open source

Yes

Yes

No

No

Offers Manual Alignment

No

No

Yes

Yes

Parallel Processing

Yes

Yes

No

No

Batch Jobs

Yes

Yes

No

No

Visualization of Sequence Networks

Yes

No

No

No