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Table 1 Substitution Profiles of Selected Viral and Non-viral Genes

From: Assessing constancy of substitution rates in viruses over evolutionary time

Substitution

Globina

Pseudogenesb

rbcLc

Tobamov.c

rbcSc

Retroel.c

TYLCVc

WSMVc

G <> A

32.4

30.1

10.7

20.0

25.0

18.6

21.7

38.0

T <> C

13.1

9.2

42.9

18.2

31.8

19.7

26.4

40.4

A <> T

9.2

9.1

36.2

18.3

9.2

22.8

19.8

7.6

A <> C

14.5

11.5

2.0

15.1

12.8

14.4

9.6

5.3

G <> C

24.5

9.5

2.1

12.2

16.2

8.1

7.2

1.4

G <> T

6.5

10.5

6.1

16.2

5.0

16.4

15.2

7.4

  1. a[1]
  2. b[2]
  3. c At t-distance = 0.10; see Figs. 1, 2, 3, 4, 5, 6.
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BMC Bioinformatics

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