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Table 1 Local motifs over represented in the immune set.

From: Intrinsically disordered domains deviate significantly from random sequences in mammalian proteins

Motif

Ratio

Immune/Non

Motif

Ratio

Immune/Non

Motif

Ratio

Immune/Non

GSPGP

1.58

9.5/6.0

PGPGL

--

15.0/0.0

APAAA

--

20.3/0.0

EDEEE

1.4

42.3/30.2

DEEEE

1.8

59.3/33.0

RGRGR

2.78

109.8/39.4

AAEAP

--

17.7/0.0

PGQPG

--

19.0/0.0

EEAEE

--

17.8/0.0

PPLPP

1.3

16.0/12.3

PGGPG

--

17.6/0.0

PPPLP

1.29

15.2/11.8

AAAEA

--

22.8/0.0

EDEED

1.7

56.4/33.2

PGPGG

1.65

14.6/8.9

PPPPL

1.35

15.2/11.2

EEEGE

1.7

18.5/10.8

SSASS

2.16

7.1/3.3

GSGSG

2.16

17.5/8.1

PAAPP

1.88

12.3/6.5

KKKKK

1.68

184.1/109.7

QPPPP

1.26

19.2/15.2

EEDEE

2.33

48.0/20.6

EEEDD

1.56

51.7/33.2

EEGEE

--

18.5/0.0

PAPAP

1.47

14.3/9.8

TTTTT

--

176.8/0.0

EAPAA

--

19.3/0.0

PGLPG

1.55

19.5/12.5

PPVPP

1.58

18.4/11.7

APAPA

1.6

13.2/8.2

SGSGS

--

11.3/0.0

QQQQP

1.29

71.7/55.4

GPGGP

--

19.0/0.0

EPEPE

--

15.8/0.0

PPPPQ

1.32

18.2/13.8

PPPPA

2.05

22.3/10.9

QQQQQ

1.34

1239.8/926.7

PAPQV

--

31.5/0.0

LPPPP

1.4

20.2/14.4

SSTSS

1.37

8.2/6.0

PQPPP

1.47

13.9/9.4

EEEEE

1.28

211.9/165.8

PLPPP

1.39

12.6/9.1

PPAPP

1.26

11.1/8.8

SSCSS

--

31.3/0.0

AEAPA

--

25.7/0.0

EEEED

1.91

73.4/38.5

PEPEP

--

14.8/0.0

EEEEV

1.53

34.9/22.9

DDEEE

--

56.4/0.0

QQPPP

1.65

29.5/17.9

GRGRG

2.65

84.4/31.9

QQQPP

1.31

38.3/29.2

EEEDE

1.27

36.7/28.9

KGEKG

--

38.1/0.0

GEEEE

1.68

25.9/15.3

GPPPP

1.45

12.4/8.5

PAAAE

--

19.3/0.0

   
  1. The criterion for including motifs in the table was that the ratio of observed over expected was higher in the immune set than in the non-immune set by a factor of at least 1.25.