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Table 1 Local motifs over represented in the immune set.

From: Intrinsically disordered domains deviate significantly from random sequences in mammalian proteins

Motif Ratio Immune/Non Motif Ratio Immune/Non Motif Ratio Immune/Non
GSPGP 1.58 9.5/6.0 PGPGL -- 15.0/0.0 APAAA -- 20.3/0.0
EDEEE 1.4 42.3/30.2 DEEEE 1.8 59.3/33.0 RGRGR 2.78 109.8/39.4
AAEAP -- 17.7/0.0 PGQPG -- 19.0/0.0 EEAEE -- 17.8/0.0
PPLPP 1.3 16.0/12.3 PGGPG -- 17.6/0.0 PPPLP 1.29 15.2/11.8
AAAEA -- 22.8/0.0 EDEED 1.7 56.4/33.2 PGPGG 1.65 14.6/8.9
PPPPL 1.35 15.2/11.2 EEEGE 1.7 18.5/10.8 SSASS 2.16 7.1/3.3
GSGSG 2.16 17.5/8.1 PAAPP 1.88 12.3/6.5 KKKKK 1.68 184.1/109.7
QPPPP 1.26 19.2/15.2 EEDEE 2.33 48.0/20.6 EEEDD 1.56 51.7/33.2
EEGEE -- 18.5/0.0 PAPAP 1.47 14.3/9.8 TTTTT -- 176.8/0.0
EAPAA -- 19.3/0.0 PGLPG 1.55 19.5/12.5 PPVPP 1.58 18.4/11.7
APAPA 1.6 13.2/8.2 SGSGS -- 11.3/0.0 QQQQP 1.29 71.7/55.4
GPGGP -- 19.0/0.0 EPEPE -- 15.8/0.0 PPPPQ 1.32 18.2/13.8
PPPPA 2.05 22.3/10.9 QQQQQ 1.34 1239.8/926.7 PAPQV -- 31.5/0.0
LPPPP 1.4 20.2/14.4 SSTSS 1.37 8.2/6.0 PQPPP 1.47 13.9/9.4
EEEEE 1.28 211.9/165.8 PLPPP 1.39 12.6/9.1 PPAPP 1.26 11.1/8.8
SSCSS -- 31.3/0.0 AEAPA -- 25.7/0.0 EEEED 1.91 73.4/38.5
PEPEP -- 14.8/0.0 EEEEV 1.53 34.9/22.9 DDEEE -- 56.4/0.0
QQPPP 1.65 29.5/17.9 GRGRG 2.65 84.4/31.9 QQQPP 1.31 38.3/29.2
EEEDE 1.27 36.7/28.9 KGEKG -- 38.1/0.0 GEEEE 1.68 25.9/15.3
GPPPP 1.45 12.4/8.5 PAAAE -- 19.3/0.0    
  1. The criterion for including motifs in the table was that the ratio of observed over expected was higher in the immune set than in the non-immune set by a factor of at least 1.25.