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Table 1 Prediction accuracy on GSCAN mice data

From: A machine learning pipeline for quantitative phenotype prediction from genotype data

Method

CD8+

MCH

SVR

0.306 (0.280-0.333)

0.147 (0.125-0.169)

L1L2

0.316 (0.283-0.347)

0.106 (0.095-0.116)

MCMC

0.314

0.111

  1. The squared correlation coefficient between predicted and true values is computed from the pipeline in Fig. 4 by different methods, with 95% bootstrap confidence interval in brackets. MCMC results are reproduced from [1].
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BMC Bioinformatics

ISSN: 1471-2105

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