Table 2 Top-correlated SNPs characteristics
From: A machine learning pipeline for quantitative phenotype prediction from genotype data
SNP name | chromosome | n | mean distance (bp) | min distance | max distance |
|---|---|---|---|---|---|
mhcCD8a2 | 6 | 16 | 724067.5 | 2701 | 1735204 |
rs13478736 | 6 | 13 | 1372896.5 | 187157 | 4078235 |
mCV24938952 | 8 | 12 | 2824059.5 | 191536 | 6126682 |
rs6375522 | 1 | 9 | 952187.1 | 115037 | 2360403 |
rs13482427 | 15 | 9 | 773579.3 | 244547 | 1555507 |
rs3145663 | 17 | 8 | 1184576.6 | 293271 | 2766351 |
rs3672987 | 17 | 7 | 3346835.3 | 1194418 | 5686326 |
rs13476229 | 1 | 6 | 813948.7 | 328290 | 1088152 |
rs3684143 | 17 | 5 | 292337.2 | 116575 | 505713 |
rs3678696 | 17 | 5 | 452020.4 | 77709 | 742231 |