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Table 3 Accuracy of the proposed method on the SMD dataset

From: A fully automatic gridding method for cDNA microarray images

 

Sub-grid Detection

Spot Detection

Image

Incorrectly

Marginally

Perfectly

Incorrectly

Marginally

Perfectly

AT-20385-CH1

0.0%

0.0%

100%

4.30%

0.46%

95.24%

AT-20385-CH2

0.0%

0.0%

100%

2.83%

0.09%

97.08%

AT-20387-CH1

0.0%

0.0%

100%

2.90%

0.14%

96.96%

AT-20387-CH2

0.0%

0.0%

100%

0.52%

0.11%

99.37%

AT-20391-CH1

0.0%

0.0%

100%

0.64%

0.17%

99.19%

AT-20391-CH2

0.0%

0.0%

100%

0.32%

0.26%

99.42%

AT-20392-CH1

0.0%

0.0%

100%

4.10%

0.33%

95.57%

AT-20392-CH2

0.0%

0.0%

100%

0.21%

0.25%

99.54%

AT-20395-CH1

0.0%

0.0%

100%

0.41%

0.12%

99.47%

AT-20395-CH2

0.0%

0.0%

100%

0.98%

0.31%

98.71%

  1. Accuracy of detected sub-grids and spots for each image of the SMD dataset and the corresponding incorrectly, marginally and perfectly aligned rates.