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Figure 2 | BMC Bioinformatics

Figure 2

From: The Proteogenomic Mapping Tool

Figure 2

Prokaryotic ePST Generation Process. a. Map the peptide to the translated genome. b. Extend the mapped peptide in the 3' direction to an in-frame stop codon. c. Extend the mapped peptide in the 5' direction to an in-frame stop codon. d. From this 5' in-frame stop codon, proceed in a 3' direction to identify an in-frame start codon. e. Final ePST. f. Generate translated ePST sequence.

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BMC Bioinformatics

ISSN: 1471-2105

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