From: SNPPicker: High quality tag SNP selection across multiple populations
SNPPicker | Snagger | multiPopTagSelect | Feature |
---|---|---|---|
X | X | Simultaneous multi-population optimization | |
X | X | Optimizes genotyping score | |
X | X | Optimizes conflicting tag SNPs | |
X | X | X | Functional class prioritization (strategy specific to each application) |
X | X | Optional selection of multiple tag SNPs per bin | |
X | Simultaneous optimization of multiple genes or regions | ||
X | Accounts for previously genotyped SNPs | ||
X | Optimizes for the Infinium assay | ||
X | Distribute conflicting SNP across multiple panel | ||
X | X | Not limited to Hapmap Samples |