From: PeakRanger: A cloud-enabled peak caller for ChIP-seq data
Algorithms | Elapsed time | Maximum memory footprint |
---|---|---|
PeakRanger | 2m9s | 2.9G |
PeakSeq | 5m11s | 1.48G |
SISSRs | 15m18s | 0.89G |
FindPeaks | 19m39s | 4.2G |
Erange | 21m31s | 0.81G |
F-Seq | 23m6s | 7.27G |
MACS | 33m13s | 1.04G |
SPP | 34m59s | 1.98G |
QuEST | 36m51s | 4.36G |
CisGenome | 55m39s | 1.85G |
GPS | 64m18s | 4.39G |