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Table 1 Profile of KEGG pathways with at least six matches to one of the stable modules

From: Inferring functional modules of protein families with probabilistic topic models

KEGG name Modules
ABC transporters 5
Flagellar assembly 1
Porphyrin and chlorophyll metabolism 1
Oxidative phosphorylation 1
Bacterial secretion system 2
Two-component system 2
Phenylalanine, tyrosine and tryptophan biosynthesis 1
Phenylalanine metabolism 1
Starch and sucrose metabolism 1
  1. The modules were identified as being stable across nine independent runs of our method with k = 200.