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Figure 4 | BMC Bioinformatics

Figure 4

From: Shape-based peak identification for ChIP-Seq

Figure 4

Examples of predicted peaks for Drosophila melanogaster. Peaks called by T-PIC, MACS, and PeakSeq for four transcription factors--caudal (cad), giant (gt), hunch-back antibody 1 (hb1), and kruppel antibody 1 (kr1)--in the even skipped (A) and snail (B) loci are shown. The coverage function for each protein is also plotted in the UCSC Genome Browser [20]. Peaks called by T-PIC are depicted with green bars, PeakSeq's peaks are in red, and the peaks called by MACS are shown in blue.

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BMC Bioinformatics

ISSN: 1471-2105

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