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Table 1 Samples used in comparison analysis

From: Shape-based peak identification for ChIP-Seq

Samples used in comparison analysis.

Protein

Sample

# of Mapped Reads

# of Input Mapped Reads

Reference

cad

D. melanogaster

4,695,843

5,275,977

[16]

gt

D. melanogaster

4,702,233

13,952,235

[16]

hb1

D. melanogaster

3,470,895

13,952,235

[16]

hb1

D. melanogaster

3,018,544

13,952,235

[16]

kr1

D. melanogaster

5,175,465

5,275,977

[16]

kr2

D. melanogaster

5,075,323

5,275,977

[16]

FoxA1

MCF7 cells

3,909,805

5,233,683

[15]

STAT1

Stimulated Hela S3 cells

26,731,492

19,476,469

[14]

  1. The samples used in the Testing section are listed along with their references. Additionally, the numbers of mapped reads for the sample and for the input are given.