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Table 2 The correlations between predictive HMV profiles in nonCpG-related and CpG-related promoters

From: Histone modification profiles are predictive for tissue/cell-type specific expression of both protein-coding and microRNA genes

    CD4SE High
    H3K4me3 H3K79me1 H3K4me3 H3K79me1
non-CpG Set I H3K79me3 0.346 0.344 0.190 0.420
   H2BK5me1 0.021 0.295 -0.072 0.378
  Set II H3K4me3 1.000 0.161 1.000 0.127
   H3K27me1 0.006 0.231 0.014 0.355
CpG    H4K20me1 H3K27ac H4K20me1 H3K27ac
  Set I H4K20me1 1.000 0.032 1.000 -0.009
   H3K27ac 0.032 1.000 -0.009 1.000
  Set II H3K4me3 0.121 0.688 -0.013 0.799
   H4K8ac -0.031 0.512 -0.121 0.748
  1. Two of the most frequently selected HMV types by our CoreBoost model in Set I and Set II are represented in rows for each subset. The two HMV types selected by the model of Karlic et al are represented in columns. The numbers are the median values of Pearson's correlation coefficient of HMV profiles in the promoter of CD4SE genes or promoter of highly expressed genes.