| | | |
CD4SE
|
High
|
|---|
| | | |
H3K4me3
|
H3K79me1
|
H3K4me3
|
H3K79me1
|
|
non-CpG
|
Set I
|
H3K79me3
|
0.346
|
0.344
|
0.190
|
0.420
|
| | |
H2BK5me1
|
0.021
|
0.295
|
-0.072
|
0.378
|
| |
Set II
|
H3K4me3
|
1.000
|
0.161
|
1.000
|
0.127
|
| | |
H3K27me1
|
0.006
|
0.231
|
0.014
|
0.355
|
|
CpG
| | |
H4K20me1
|
H3K27ac
|
H4K20me1
|
H3K27ac
|
| |
Set I
|
H4K20me1
|
1.000
|
0.032
|
1.000
|
-0.009
|
| | |
H3K27ac
|
0.032
|
1.000
|
-0.009
|
1.000
|
| |
Set II
|
H3K4me3
|
0.121
|
0.688
|
-0.013
|
0.799
|
| | |
H4K8ac
|
-0.031
|
0.512
|
-0.121
|
0.748
|
- Two of the most frequently selected HMV types by our CoreBoost model in Set I and Set II are represented in rows for each subset. The two HMV types selected by the model of Karlic et al are represented in columns. The numbers are the median values of Pearson's correlation coefficient of HMV profiles in the promoter of CD4SE genes or promoter of highly expressed genes.
