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Table 5 Optimal SOM parameter values.

From: Conformational and functional analysis of molecular dynamics trajectories by Self-Organising Maps

Case Map size Radius Training
length
Neighbour function Actual Predicted Time (s)
WT 100 3 5000 gaussian 158 156 50
R21G 100 3 5000 gaussian 265 270 50
WT+R21G 100 3 5000 gaussian 259 238 105
ALL 100 3 5000 gaussian 254 246 340
  1. See Table 1 for the parameter definition.