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Table 2 Number of breakpoints recovered

From: More accurate recombination prediction in HIV-1 using a robust decoding algorithm for HMMs

Method Single breakpoint 1000-1000 500-1500 300-1500
Viterbi 105/106 359/360 327/360 344/360
max ball, r = 5 105/106 360/360 326/360 350/360
max ball, r = 7 105/106 360/360 326/360 350/360
max ball, r = 10 105/106 360/360 326/360 350/360
max ball, r = 15 105/106 360/360 326/360 350/360
min region 105/106 360/360 326/360 350/360
DualBrothers 76/106 146/360 81/360 27/360
  1. Shown are the fractions of recovered breakpoints for each experiment.