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Table 2 The four groups of bacterial species used in this study

From: Bacterial syntenies: an exact approach with gene quorum

bacteria Bacteria   
Acnum Species Mb NbGenes
AE000512_GR Thermotoga maritima (strain JCM 10099/DSM 3109) 1.9 1853
AE009951_GR Fusobacterium nucleatum nucleatum (strain JCM 8532) 2.2 2069
AL009126_GR Bacillus subtilis (strain 168) 4.2 4237
BA000022_GR Synechocystis sp. (strain PCC 6803) 3.6 3166
U00096_GR Escherichia coli (strain K12) 4.6 4320
AE000520_GR Treponema pallidum (strain Nichols) 1.1 1028
AE001273_GR Chlamydia trachomatis (strain D/UW-3/Cx) 1.0 895
AM398681_GR Flavobacterium psychrophilum (strain JIP02/86) 2.8 2432
BX248353_GR Corynebacterium diphtheriae (strain NCTC 13129) 2.5 2317
CP000359_GR Deinococcus geothermalis (strain DSM 11300) 2.5 2330
proteo Bacteria; Proteobacteria   
acnum Species Mb NbGenes
AE005673_GR Caulobacter crescentus (strain CB15/ATCC 19089) 4.0 3738
AE016825_GR Chromobacterium violaceum (strain IFO 12614) 4.7 4407
AE017282_GR Methylococcus capsulatus (strain Bath/NCIMB 11132) 3.3 2960
CP000661_GR Rhodobacter sphaeroides (strain ATCC 17025) 3.2 3111
U00096_GR Escherichia coli (strain K12) 4.6 4320
CP000112_GR Desulfovibrio desulfuricans (strain G20) 3.7 3775
AE001439_GR Helicobacter pylori (strain J99) 1.6 1491
CP000251_GR Anaeromyxobacter dehalogenans (strain 2CP-C) 5.0 4346
CP000744_GR Pseudomonas aeruginosa (strain PA7) 6.6 6286
CP000814_GR Campylobacter jejuni (subsp. jejuni, serovar O:6) 1.6 1626
gamma Bacteria; Proteobacteria; Gammaproteobacteria   
acnum Species Mb NbGenes
AE017282_GR Methylococcus capsulatus (strain Bath/NCIMB 11132) 3.3 2960
CP000127_GR Nitrosococcus oceani (strain ATCC 19707/NCIMB 11848) 3.5 2976
CP000462_GR Aeromonas hydrophila (subsp. hydrophila, ATCC 7966) 4.7 4122
CP000744_GR Pseudomonas aeruginosa (strain PA7) 6.6 6286
U00096_GR Escherichia coli (strain K12) 4.6 4320
CP000675_GR Legionella pneumophila (strain Corby) 3.6 3204
CP000681_GR Shewanella putrefaciens (strain CN-32/ATCC BAA-453) 4.7 3972
CP001091_GR Actinobacillus pleuropneumoniae (serovar 7, AP6/AP76) 2.3 2131
CP001132_GR Acidithiobacillus ferrooxidans (strain ATCC 53993) 2.9 2826
AM920689_GR Xanthomonas campestris (pathovar campestris) 5.1 4510
enterob Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae   
acnum Species Mb NbGenes
AE006468_GR Salmonella typhimurium (strain ATCC 700720) 4.9 4455
AE009952_GR Yersinia pestis (biovar Mediaevalis, strain KIM5) 4.6 4104
CP000822_GR Citrobacter koseri (strain ATCC BAA-895) 4.7 5003
CP000964_GR Klebsiella pneumoniae (strain 342) 5.6 5425
U00096_GR Escherichia coli (strain K12) 4.6 4320
AE005674_GR Shigella flexneri (serovar 2a, strain 301) 4.6 4395
AP008232_GR Sodalis glossinidius (strain morsitans) 4.2 2432
BX470251_GR Photorhabdus luminescens laumondii (strain TT01) 5.7 4897
BX950851_GR Erwinia carotovora (subsp. atroseptica, ATCC BAA-672) 5.1 4491
CP000653_GR Enterobacter sp. (strain 638) 4.5 4115
  1. Detail of the four groups of bacterial species at various phylogenetic distances used in this study. Each group is composed of 5 (first 5 lines) or 10 species. acnum: accession number in the EMBL/Genome Reviews databank; Mb: size of the genome in Mb; NbGenes: number of protein-encoding genes in the genome.