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Figure 4 | BMC Bioinformatics

Figure 4

From: Acorn: A grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks via a web interface

Figure 4

The model import interface. The user is prompted to provide the name of the SBML file with the BiGG database annotations representing FBA specific information. Subsequently, the user specifies model name and an organism. The user can than link gene names to the functional genomics portal of choice by providing the HTTP address with the gene name replaced by "%s" string. This address template is then used to link individual genes on model pages to the corresponding pages of the functional genomics portal.

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BMC Bioinformatics

ISSN: 1471-2105

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