| HMM-FRAME: G20 | HMM-FRAME: self-trained | GeneWise | FragGeneScan |
---|
seq-sen |
95.25%
| 90.6% | 53.8% | 83.04% |
base-sen |
85.08%
| 82.4% | Â | 53.39% |
seq-FP | 0.154% |
0
| 0.001% | 0.7% |
base-FP | 2.1% |
0.003%
| Â | 59.57% |
- Sensitivity and FP rate of each program when detecting annotated insertion and deletion errors in nifH genes. seq-sen: sequence-level sensitivity. base-sen: base-level sensitivity. seq-FP: sequence-level FP rate. base-FP: base-level FP rate. The score cutoff of Genewise is set to zero to maximize the sensitivity. As Genewise has low sequence-level sensitivity, we did not evaluate its performance at the base-level.