Table 1 Performance in server with processor Xeon D5060 3.2 GHz (CPU time)
From: Qxpak.5: Old mixed model solutions for new genomics problems
Step | Linkage dataset (N = 780, 187 microsats) | GWAS dataset (N = 560, 39,209 SNPs) |
|---|---|---|
Computing IBD coefficients | 15' | - |
QTL scan | 1' | 30' |
Scan with infinitesimal genetic effect | 15' | 3 h19' |