Skip to main content

Table 1 Number of edges in the graph with evidence from the four information sources after applying a threshold on the relevant strength of the relationships (as defined in the Methods section)

From: Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis

COE LIT PPI SEQ Exclusive combinations Inclusive combinations
     N % N %
9 0.04 9 0.04
  34 0.14 43 0.17
  83 0.33 92 0.37
   84 0.33 210 0.83
  17 0.07 26 0.10
    63 0.25 123 0.49
   15 0.60 260 1.03
    9093 36.12 9534 37.88
  123 0.49 132 0.52
    482 1.91 648 2.57
    692 2.75 907 3.60
     4441 17.64 5948 23.63
   240 0.95 389 1.55
     3459 13.74 4427 17.59
    6201 24.63 7516 29.86
  1. Exclusive combinations count edges where the evidence that links two nodes comes only from the sources indicated, while inclusive combinations allow the possibility of additional evidence types also supporting that link.