Table 4 Concordance of detected CNV segments using PennCNV and CRLMM/VanillaIce for 1,266 subjects that passed PennCNV and CRLMM QC metrics
| Â | Quantile | ||||
|---|---|---|---|---|---|
| Â | 0% (Min) | 25% | 50% (Median) | 75% | 100% (Max) |
Duplications | Â | Â | Â | Â | Â |
   Concordance | 0.0 | 26.3 | 47.9 | 68.2 | 100.0 |
PennCNV only | 0.0 | 24.7 | 44.9 | 67.9 | 100.0 |
CRLMM/VanillaIce only | 0.0 | 0.3 | 2.1 | 7.1 | 100.0 |
Deletions | Â | Â | Â | Â | Â |
   Concordance | 0.4 | 37.5 | 51.5 | 65.5 | 95.8 |
PennCNV only | 0.0 | 23.0 | 37.5 | 53.6 | 94.0 |
CRLMM/VanillaIce only | 0.0 | 2.3 | 5.0 | 11.8 | 96.7 |