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Table 2 Strain sequences used for LAMP signature comparison between LAVA and PrimerExplorer

From: LAVA: An Open-Source Approach To Designing LAMP (Loop-Mediated Isothermal Amplification) DNA Signatures

GenBank GI Number

GenBank Accession Number

Sequence Description

82749777

NC_007622.1

Staphylococcus aureus RF122, complete genome

148266447

NC_009487.1

Staphylococcus aureus subsp. aureus JH9, complete genome

150392480

NC_009632.1

Staphylococcus aureus subsp. aureus JH1, complete genome

57634611

NC_002758.2

Staphylococcus aureus subsp. aureus Mu50, complete genome

29165615

NC_002745.2

Staphylococcus aureus subsp. aureus N315, complete genome

21281729

NC_003923.1

Staphylococcus aureus subsp. aureus MW2, complete genome

88193823

NC_007795.1

Staphylococcus aureus subsp. aureus NCTC 8325, complete genome

57650036

NC_002951.2

Staphylococcus aureus subsp. aureus COL, complete genome

49482253

NC_002952.2

Staphylococcus aureus subsp. aureus MRSA252, complete genome

49484912

NC_002953.3

Staphylococcus aureus subsp. aureus MSSA476, complete genome

87159884

NC_007793.1

Staphylococcus aureus subsp. aureus USA300, complete genome

161508266

NC_010079.1

Staphylococcus aureus subsp. aureus USA300_TCH1516, complete genome

151220212

NC_009641.1

Staphylococcus aureus subsp. aureus str. Newman, complete genome

156978331

NC_009782.1

Staphylococcus aureus subsp. aureus Mu3, complete genome