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Table 7 Boundaries of Safe, Twilight and Dark Zones used by PS-HomPPI.

From: HomPPI: a class of sequence homology based protein-protein interface prediction methods

 

LogEVal

≤ -100

Safe Zone

PositiveS

≥70%

 

Frace AA '

≥80%

 

Frace BB '

≥80%

 

LogEVal

≤ -50

Twilight Zone 1

PositiveS

≥60%

 

Frace AA '

≥60%

 

Frace BB '

≥60%

 

LogEVal

≤ 1

Twilight Zone 2

PositiveS

≥55%

 

Frace AA '

≥40%

 

Frace BB '

≥40%

 

LogEVal

≤ 1

Dark Zone

PositiveS

≥0

 

Frace AA '

≥0

 

Frace BB '

≥0