Table 2 Comparision of prediction performance of BEOracle with BCPred and Bepipred on peptide antibodies used in modENCODE project
From: Determinants of antigenicity and specificity in immune response for protein sequences
modENCODE | BEOracle | BCPred | Bepipred |
|---|---|---|---|
Rabbit anti-Stat92E | 1 | 1 | 0 |
HDAC6-497 | 1 | 1 | 0 |
HDAC3-499 | 1 | 0 | 0 |
HDAC1-501 | 1 | 0 | 1 |
Egg (Kang) | 1 | 1 | 0 |
chinmo 70850 | 1 | 0 | 1 |
CP190 | 1 | 0 | 0 |
CTCF-C | 1 | 0 | 0 |
sens | 1 | 1 | 1 |
HP1 wa191 | 1 | 1 | 0 |
CTCF-N | 0 | 1 | 1 |
HP1 wa192 | 1 | 1 | 1 |
HDAC4a-492 | 1 | 0 | 1 |
HA | 1 | 0 | 1 |
HDAC1-500 | 1 | 1 | 1 |
HP1c (Henikoff) | 1 | 1 | 0 |
HDAC6-496 | 1 | 1 | 1 |
HDAC3-498 | 1 | 0 | 1 |
HDAC11-495 | 1 | 1 | 1 |
JL00012_DPY28 | 1 | 1 | 1 |
POF | 1 | 1 | 1 |
BEAF-32 | 1 | 0 | 0 |
HDAC11-494 | 1 | 1 | 0 |
HDAC4a-493 | 1 | 0 | 0 |
anti-HTZ-1 | 1 | 1 | 1 |
HP1b (Henikoff) | 1 | 1 | 1 |