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Table 7 The comprison of independent testing.

From: PlantPhos: using maximal dependence decomposition to identify plant phosphorylation sites with substrate site specificity

Method Phosphorylated residue Pre (%) Sn (%) Sp (%) Acc (%)
Single HMM S 52.6% 50.6% 77.2% 68.3%
  T 50.0% 20.9% 89.5% 66.6%
  Y 36.3% 28.5% 75.0% 59.5%
MDD-clustered HMMs S 74.2% 81.4% 71.6% 76.5%
  T 71.8% 77.1% 69.7% 73.4%
  Y 72.8% 83.7% 68.7% 76.2%
PhosPhAt 3.0 S 55.5% 61.9% 50.6% 56.2%
  T 55.0% 57.1% 53.3% 55.2%
  Y 4.0% 14.2% 78.5% 46.4%
NetPhos 2.0 S 58.6% 71.6% 49.3% 60.5%
  T 47.5% 36.1% 59.6% 47.8%
  Y 44.4% 28.5% 64.2% 46.4%
DisPhos 1.3 S 66.8% 60.6% 69.3% 65.0%
  T 47.5% 36.1% 61.2% 48.6%
  Y 57.1% 47.5% 64.2% 55.8%