Table 3 The first-stage selection orders of the 6 different models
From: Network-based group variable selection for detecting expression quantitative trait loci (eQTL)
Trait | Model 1 (Additive) | Model 2 (Two-effect) | Model 3 (Interactions) | Model 4 (Interactions) | Model 5 (Sex-dependent) |
|---|---|---|---|---|---|
Ankrd24 | 6, 3, 7,18,11 | 2, 3,11, 4,10 | 10, 2, 3,13, 6 | 2,10, 3,11, 4 | Sex,10,11, 2, 3 |
Sfrp1 | 6,11, 3,16,15 | 10, 2, 3,11, 4 | 10,12, 2, 3,13 | 10, 2,12,11,13 | Sex,10,11, 4, 3 |
Ergic1 | 13, 6,15,11,12 | 2, 3,11,13,10 | 10,13, 2,12,11 | 2,10,13,11, 8 | Sex,10, 2,11, 9 |
Trait | Model 6 (Kernels) | ||||
| Â | Linear | Polynomial | Gaussian | IBS | WIBS |
Ankrd24 | 3,18, 6,15, 7 | 2, 3,10,11, 5 | 10, 2, 1, 7,11 | 10, 3, 2, 6, 7 | 10, 2, 3, 6, 7 |
Sfrp1 | 11, 6, 3,15,13 | 10,11, 3, 2, 5 | 10, 2,11, 1, 7 | 10, 6, 3,11,12 | 10, 6, 3,12,11 |
Ergic1 | 13,15,12,11, 6 | 10, 2,13, 3,11 | 10, 2,11, 1, 7 | 10,13,14, 2, 6 | 10,13, 2,14, 9 |