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Table 1 Benchmark comparison between algorithms "complete scan" and "hill-climbing"

From: CODA (crossover distribution analyzer): quantitative characterization of crossover position patterns along chromosomes

 

Computing time

Interference strength (nu)

p

Complete scan

7 h 10 min

5.60

0.180

Hill-climbing

2 min 40 s

5.72

0.185

  1. Complete scan results obtained with the GS model using the likelihood, for 1 ≤ nu ≤ 15 and a step of 0.05; 0 ≤ p ≤ 0.5 and a step of 0.01. Hill- climbing results were obtained with a precision of 0.01 and 0.001 for nu and p respectively. Data is Maize late nodule positions on chromosome 1 [8].