Algal Functional Annotation Tool: a web-based analysis suite to functionally interpret large gene lists using integrated annotation and expression data

Table 1 List of annotation resources integrated into the Algal Functional Annotation Tool

Resource	URL	Reference
KEGG	http://www.genome.jp/kegg/	[1]
MetaCyc	http://www.metacyc.org/	[2]
Pfam	http://pfam.sanger.ac.uk	[3]
Reactome	http://www.reactome.org/	[28]
Panther	http://www.pantherdb.org/pathway	[30]
Gene Ontology	http://www.geneontology.org/	[31]
InterPro	http://www.ebi.ac.uk/interpro	[32]
MapMan Ontology	http://mapman.gabipd.org/	[33]
KOG	http://www.ncbi.nlm.nih.gov/COG/grace/shokog.cgi	[35]

Primary databases used to functionally annotate gene models and integrated into the Algal Functional Annotation Tool.

ISSN: 1471-2105