|  | Mamanova et al. | Marioni et al. | Bullard et al. | Lee et al | Nagalakshmi et al. | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
Dinuc | Read type | STD-Seq | FRT- Seq | Marioni kidney | Marioni liver | MAQC2 brain | MAQC2 UHR | MAQC3 UHR | yeast RH | yeast oligodT | yeast RH |
AA | unique | 4.5 | 9.3 | 6.1 | 8.4 | 2.1 | 2.2 | 2.7 | 5.2 | 10.8 | 10.3 |
AA | multi | 4.5 | 10.3 | 6.7 | 7.9 | 2.5 | 2.6 | 3.0 | 4.0 | 10.1 | 7.9 |
AC | unique | 1.5 | 5.2 | 1.4 | 1.4 | 0.9 | 1.0 | 0.8 | 1.4 | 6.4 | 5.4 |
AC | multi | 2.1 | 5.8 | 1.3 | 1.3 | 1.0 | 1.0 | 0.9 | 1.3 | 6.0 | 5.2 |
AG | unique | 2.5 | 7.1 | 3.0 | 3.2 | 2.2 | 2.2 | 2.2 | 2.3 | 7.8 | 5.9 |
AG | multi | 3.3 | 6.6 | 2.8 | 3.0 | 2.1 | 2.2 | 2.1 | 2.0 | 6.9 | 4.8 |
AT | unique | 3.4 | 7.2 | 5.7 | 6.8 | 1.9 | 2.0 | 2.4 | 4.7 | 7.4 | 5.7 |
AT | multi | 3.9 | 5.4 | 6.0 | 7.0 | 2.3 | 2.4 | 2.7 | 4.3 | 7.8 | 5.0 |
CA | unique | 8.9 | 5.4 | 7.7 | 7.0 | 10.7 | 10.6 | 10.5 | 8.7 | 10.6 | 11.1 |
CA | multi | 7.3 | 5.2 | 6.2 | 5.6 | 10.0 | 11.0 | 10.9 | 7.8 | 10.9 | 10.2 |
CC | unique | 9.6 | 4.0 | 7.8 | 5.8 | 10.8 | 10.2 | 10.4 | 5.6 | 6.0 | 6.3 |
CC | multi | 9.0 | 4.2 | 7.2 | 5.4 | 9.6 | 8.8 | 9.4 | 7.3 | 5.5 | 7.7 |
CG | unique | 5.5 | 2.3 | 4.4 | 3.4 | 10.0 | 10.1 | 10.4 | 7.2 | 2.0 | 2.9 |
CG | multi | 5.8 | 2.9 | 5.2 | 4.6 | 9.9 | 8.7 | 9.1 | 8.6 | 2.2 | 4.3 |
CT | unique | 12.2 | 5.8 | 13.3 | 11.6 | 13.1 | 13.0 | 13.3 | 12.2 | 7.9 | 7.4 |
CT | multi | 13.0 | 6.0 | 13.0 | 11.2 | 13.4 | 13.5 | 13.7 | 13.1 | 7.8 | 9.1 |
GA | unique | 4.0 | 6.7 | 4.9 | 5.3 | 5.2 | 5.4 | 4.5 | 7.0 | 4.9 | 5.4 |
GA | multi | 4.5 | 6.1 | 4.7 | 5.2 | 5.3 | 5.8 | 4.7 | 6.2 | 5.0 | 5.3 |
GC | unique | 12.5 | 5.7 | 7.7 | 6.9 | 11.7 | 12.0 | 10.0 | 8.6 | 2.2 | 3.0 |
GC | multi | 11.2 | 6.2 | 8.1 | 7.6 | 11.1 | 11.6 | 9.8 | 10.3 | 1.8 | 3.2 |
GG | unique | 13.0 | 5.0 | 9.2 | 8.8 | 12.0 | 11.9 | 11.8 | 8.7 | 3.8 | 4.2 |
GG | multi | 11.7 | 6.0 | 9.8 | 9.6 | 11.7 | 11.4 | 11.1 | 8.6 | 4.1 | 5.2 |
GT | unique | 9.8 | 5.7 | 10.1 | 9.5 | 8.4 | 8.6 | 8.4 | 12.3 | 4.2 | 5.2 |
GT | multi | 9.2 | 5.0 | 10.4 | 10.0 | 9.2 | 9.1 | 9.1 | 11.8 | 4.6 | 6.9 |
TA | unique | 1.6 | 5.2 | 3.7 | 4.4 | 1.1 | 1.1 | 1.3 | 2.2 | 10.8 | 10.8 |
TA | multi | 1.7 | 3.8 | 4.3 | 5.0 | 1.4 | 1.1 | 1.4 | 2.1 | 11.2 | 10.3 |
TC | unique | 2.1 | 6.8 | 3.0 | 3.2 | 2.1 | 2.2 | 2.3 | 2.9 | 3.9 | 4.8 |
TC | multi | 2.8 | 6.0 | 2.7 | 3.0 | 2.1 | 2.2 | 2.3 | 3.0 | 3.8 | 4.2 |
TG | unique | 6.1 | 6.9 | 5.6 | 5.6 | 4.7 | 4.9 | 5.4 | 5.1 | 7.9 | 8.4 |
TG | multi | 5.7 | 8.2 | 5.5 | 5.6 | 4.8 | 5.3 | 5.8 | 4.7 | 8.7 | 7.8 |
TT | unique | 2.7 | 11.4 | 6.3 | 8.4 | 2.5 | 2.5 | 3.6 | 5.9 | 3.5 | 3.3 |
TT | multi | 4.1 | 12.1 | 6.2 | 7.9 | 2.9 | 2.9 | 4.0 | 4.8 | 3.4 | 2.7 |